Sub clover Marker Database

RCS6502 Information

Marker name RCS6502
Marker category Red_clover_SSR
Primer sequences Fw TCACAATGTCACCAACAAAACA
Rv TTGCACTTTTTCTCAGTGGCT
EST/Genome sequences BB919638
Lines
PIC Value 0.756151
Lines 48
Map Woogenellup x Daliak [SNP] Linkage LG3
Position 846.21
Woogenellup x Daliak [SSR] Linkage LGc
Position 22.33
SNP Position
Method
SSR Fragment size 164
Pattern* AAT
Repeat count 15
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS6502
Enzyme
Related markers Marker name RCS6502
Species Trifolium pratense
Comments
Related marker: AP009631 ; Related species: Lotus japonicus

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum