Sub clover Marker Database

RCS6283 Information

Marker name RCS6283
Marker category Red_clover_SSR
Primer sequences Fw AGCCCTGCTTTTTCTCCTCT
Rv GCAGGGCTGAGACTCCAGTA
EST/Genome sequences BB917542
Lines
PIC Value
Lines
Map Woogenellup x Daliak [SNP] Linkage LG4
Position 20686.4
Woogenellup x Daliak [SSR] Linkage LGd
Position 219.36
SNP Position
Method
SSR Fragment size 240
Pattern* AAAT
Repeat count 16
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS6283
Enzyme
Related markers Marker name RCS6283
Species Trifolium pratense
Comments
Related marker: AP007306 ; Related species: Lotus japonicus

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum