Sub clover Marker Database

RCS6272 Information

Marker name RCS6272
Marker category Red_clover_SSR
Primer sequences Fw TCATAAGCCAAATGAGCACG
Rv GGATGGTTGTTCCTGATGCT
EST/Genome sequences BB917418
Lines
PIC Value
Lines
Map
(Denmark x DGI007 [SSR])
Linkage LGa
Position 107.6
SNP Position
Method
SSR Fragment size 157
Pattern* AAG
Repeat count 15
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS6272
Enzyme
Related markers Marker name RCS6272
Species Trifolium pratense
Comments
Related marker: AP007860, mth2-155o19 ; Related species: Lotus japonicus, Medicago truncatula

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum