Sub clover Marker Database

RCS6239 Information

Marker name RCS6239
Marker category Red_clover_SSR
Primer sequences Fw GCACTTGCTATAACCTAAACTTCTTC
Rv ATGAGCACTTTCCCATCCAC
EST/Genome sequences BB917107
Lines
PIC Value
Lines
Map Woogenellup x Daliak [SNP] Linkage LG6
Position 569.41
Woogenellup x Daliak [SSR] Linkage LGf
Position 37.99
SNP Position
Method
SSR Fragment size 162
Pattern* ACT
Repeat count 15
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS6239
Enzyme
Related markers Marker name RCS6239
Species Trifolium pratense
Comments
Related marker: AP007483, mth2-7g24 ; Related species: Lotus japonicus, Medicago truncatula

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum