Sub clover Marker Database

RCS5949 Information

Marker name RCS5949
Marker category Red_clover_SSR
Primer sequences Fw TCACAATGGCAGAATCATGG
Rv TTTCATTTGGATCCTCCTCG
EST/Genome sequences BB914911
Lines
PIC Value
Lines
Map
(Denmark x DGI007 [SSR])
Linkage LGe
Position 435.75
SNP Position
Method
SSR Fragment size 255
Pattern* ATC
Repeat count 15
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5949
Enzyme
Related markers Marker name RCS5949
Species Trifolium pratense
Comments
Related marker: AP010611 ; Related species: Lotus japonicus

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum