Sub clover Marker Database

RCS5056 Information

Marker name RCS5056
Marker category Red_clover_SSR
Primer sequences Fw CGCTAGATTCTGCTCTCGCT
Rv TGAAAACGCCGAAGAGAAGT
EST/Genome sequences BB911300
Lines
PIC Value 0.725229
Lines 48
Map Woogenellup x Daliak [SNP] Linkage LG5
Position 6075.58
Woogenellup x Daliak [SSR] Linkage LGe
Position 33.7
SNP Position
Method
SSR Fragment size 226
Pattern* AAAG
Repeat count 20
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5056
Enzyme
Related markers Marker name RCS5056
Species Trifolium pratense
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum