Sub clover Marker Database

RCS4501 Information

Marker name RCS4501
Marker category Red_clover_SSR
Primer sequences Fw TTGTCCCTAATGAATTTCCACC
Rv TGTGTTCCGACAAAAATCCA
EST/Genome sequences BB908062
Lines
PIC Value
Lines
Map Woogenellup x Daliak [SNP] Linkage LG1
Position 1659.83
Woogenellup x Daliak [SSR] Linkage LGa
Position 38.17
SNP Position
Method
SSR Fragment size 222
Pattern* AAT
Repeat count 17
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS4501
Enzyme
Related markers Marker name RCS4501
Species Trifolium pratense
Comments
Related marker: mth2-151m4 ; Related species: Medicago truncatula

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum