Sub clover Marker Database

RCS4244 Information

Marker name RCS4244
Marker category Red_clover_SSR
Primer sequences Fw ATTATGGCAGCAGAAATGGC
Rv CCTTGGTGTCAAAAGGGTCT
EST/Genome sequences BB906376
Lines
PIC Value
Lines
Map
(Denmark x DGI007 [SSR])
Linkage LGc
Position 138.54
SNP Position
Method
SSR Fragment size 195
Pattern* AAC
Repeat count 21
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS4244
Enzyme
Related markers Marker name RCS4244
Species Trifolium pratense
Comments
Related marker: AP004541, mth2-34a12 ; Related species: Lotus japonicus, Medicago truncatula

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum