Sub clover Marker Database

RCS3279 Information

Marker name RCS3279
Marker category Red_clover_SSR
Primer sequences Fw TTTCTCTTGTTCCATTGGGG
Rv CATTGTTGTCGCGGTTATTG
EST/Genome sequences DE234533
Lines
PIC Value
Lines
Map
(Denmark x DGI007 [SSR])
Linkage LGe
Position 271.88
SNP Position
Method
SSR Fragment size 288
Pattern* AAT
Repeat count 17
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS3279
Enzyme
Related markers Marker name RCS3279
Species Trifolium pratense
Comments
Related marker: AP004978, mth2-30e7 ; Related species: Lotus japonicus, Medicago truncatula

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum