Sub clover Marker Database

RCS1920 Information

Marker name RCS1920
Marker category Red_clover_SSR
Primer sequences Fw GAGAAAAGAAAGAAGTCTCTGAAGGA
Rv CCCCCAAAATACAAAACCCT
EST/Genome sequences BB933307
Lines
PIC Value
Lines
Map
(Denmark x DGI007 [SSR])
Linkage LGa
Position 215.06
SNP Position
Method
SSR Fragment size 220
Pattern* AAG
Repeat count 13
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS1920
Enzyme
Related markers Marker name RCS1920
Species Trifolium pratense
Comments
Related marker: AP007774, mth2-62c22 ; Related species: Lotus japonicus, Medicago truncatula

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum