Sub clover Marker Database

RCS1200 Information

Marker name RCS1200
Marker category Red_clover_SSR
Primer sequences Fw TCATTCTTCCACCGACAACA
Rv CGTAGCGTTGAGCTTTTGTG
EST/Genome sequences BB928863
Lines
PIC Value 0.805699
Lines 48
Map Woogenellup x Daliak [SNP] Linkage LG7
Position 2932.24
Woogenellup x Daliak [SSR] Linkage LGg
Position 3.85
SNP Position
Method
SSR Fragment size 170
Pattern* AC
Repeat count 14
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS1200
Enzyme
Related markers Marker name RCS1200
Species Trifolium pratense
Comments
Related marker: mth2-85c24 ; Related species: Medicago truncatula

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum