Sub clover Marker Database

RCS1150 Information

Marker name RCS1150
Marker category Red_clover_SSR
Primer sequences Fw CTTCCCAAACACGCCTTAAA
Rv AGCAGGGGTAACACAGCAAT
EST/Genome sequences DE218048
Lines
PIC Value 0.823197
Lines 48
Map Woogenellup x Daliak [SNP] Linkage LG6
Position 541.04
Woogenellup x Daliak [SSR] Linkage LGf
Position 9.62
SNP Position
Method
SSR Fragment size 237
Pattern* AAG
Repeat count 16
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS1150
Enzyme
Related markers Marker name RCS1150
Species Trifolium pratense
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum