Sub clover Marker Database

RCS1113 Information

Marker name RCS1113
Marker category Red_clover_SSR
Primer sequences Fw CATCCTCCAAAACCCTCCTT
Rv TCATCATCATCACCGGAAAG
EST/Genome sequences DE217912
Lines
PIC Value 0.805311
Lines 48
Map Woogenellup x Daliak [SNP] Linkage LG5
Position 16334.1
Woogenellup x Daliak [SSR] Linkage LGe
Position 83.2
SNP Position
Method
SSR Fragment size 158
Pattern* GGT
Repeat count 21
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS1113
Enzyme
Related markers Marker name RCS1113
Species Trifolium pratense
Comments
Related marker: AP009675 ; Related species: Lotus japonicus

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium subterraneum